AMBER Archive (2008)

Subject: Re: AMBER: Error: Bond: Maximum coordination exceeded -- setting atoms pert=true overrides default limits

From: David A. Case (
Date: Fri Apr 18 2008 - 17:00:23 CDT

On Tue, Apr 15, 2008, Ted Fischer wrote:

> > > I am experiencing a problem with tleap setting up a system of multiple
> > > solutes not connected to another. I am using a pdb file that I manually
> > > edited in accordance to the syntax that was previously successful.

> I have attempted to simulate with various large numbers of solute molecules
> without success, always receiving the same error msg, while small systems
> seem to work just fine.

I've entered this into bugzilla, and I think I have a similar error in another
context. I know it's not much consolation now, but we are trying to figure
out what is going on here.

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