AMBER Archive (2008)

Subject: Re: AMBER: NAB examples

From: David A. Case (
Date: Mon Apr 07 2008 - 10:33:26 CDT

On Mon, Apr 07, 2008, Hu, Shaowen (JSC-SK)[USRA] wrote:
> Thanks for your efforts for providing new tools for AMBER. I have
> trouble to generate trajectory for NAB MD. Could somebody kindly refer
> to some more examples?

It would be helpful if you said what you tried, and what the result was.

The final parameter to mme_init() give the file name for the trajectory file;
the "ntwx" paramter in mm_options gives the frequency at which the trajectory
is written.

Hope this helps....dac

The AMBER Mail Reflector
To post, send mail to
To unsubscribe, send "unsubscribe amber" to