AMBER Archive (2008)

Subject: AMBER: artifacts in ptraj avg output

From: stephane acoca (
Date: Sat Apr 05 2008 - 03:46:55 CDT

HI , I ran an MD and tried to output the average structure of the protein.
When I do that, the protein seems to have numerous artifacts. I added the
protein structure for you guys to see what i'm talking about.


The AMBER Mail Reflector
To post, send mail to
To unsubscribe, send "unsubscribe amber" to