AMBER Archive (2008)

Subject: AMBER: AMBER 9 testing

From: Taufik Al-Sarraj (
Date: Fri Mar 28 2008 - 19:18:30 CDT


i just installed AMBER 9 in an IRIX machine, i wanted to make sure i
installed the program correctly. I am using IRIX 6.5

i used ./configure -mpi sgi_mips
and make parallel

under $AMBERHOME/test/

i tried
make test.sander
don't know how to make test.sander (bu42)


make test.leap
cd leap; ./Run.tleap
Error: ./tleap --> ../../exe/teLeap does not exist
Error code 1 (bu21)

It may be that my installation not correct. however i did not get errors
after make parallel.

i am not sure what the option should be for
setenv DO_PARALLEL 'mpirun -np 4'

Thank you for help,

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