AMBER Archive (2008)

Subject: Re: AMBER: Convert dcd to mdcrd

From: Vlad Cojocaru (Vlad.Cojocaru_at_eml-r.villa-bosch.de)
Date: Wed Mar 26 2008 - 04:02:38 CDT

Dear Seth,

you can use ptraj to read the dcd and write an mdcrd ....
But why would you want to do that?? The dcd file is ~ half the size and
itis faster to load into visualization software such as VMD ...

Cheers
vlad

Seth Lilavivat wrote:
> Dear Amber users,
>
> Is there an easy way to convert a .dcd (namd trajectory) file to a
> .mdcrd?
>
> Thanks,
> Seth 

-- 
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Dr. Vlad Cojocaru

EML Research gGmbH
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Tel: ++49-6221-533266
Fax: ++49-6221-533298

e-mail:Vlad.Cojocaru[at]eml-r.villa-bosch.de

http://projects.villa-bosch.de/mcm/people/cojocaru/

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