AMBER Archive (2008)

Subject: RE: AMBER: Water Topology

From: Ross Walker (
Date: Wed Mar 19 2008 - 23:49:43 CDT

Dear Ivelin,

> It seems that the topology file for water molecules,, is
> missing from both the Amber9 distribution, as well as the
> online archive
> of the force field parameter files. I am wondering how the
> file
> (or an equivalent topology file) may be obtained.

Where did you see a reference to

I was not aware there should be such a file. The water models and other
solvent models are all loaded into leap via frcmod files that source the
file $AMBERHOME/dat/leap/lib/solvents.lib

This defines the following models:

All the best

|\oss Walker

| Assistant Research Professor |
| San Diego Supercomputer Center |
| Tel: +1 858 822 0854 | EMail:- |
| | PGP Key available on request |

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