AMBER Archive (2008)

Subject: AMBER: Visualizing Periodc box

From: Vijay Manickam Achari (vjrajamany_at_yahoo.com)
Date: Fri Feb 29 2008 - 01:50:13 CST

Dear sir,

I load 8.pdb file in xleap and used the command setbox [unit] vdw.
It created rectangular box around self-assembly.
If I want to see the periodic box in xleap, what shall I do?

I want to see the weather the molecules are far of nearby by looking at the structure.

Thank you.
Vijay.M Achari

Vijay Manickam Achari
(Phd Student c/o Prof Rauzah Hashim)
Chemistry Department,
University of Malaya,
Malaysia
 vjramana_at_gmail.com
       
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