AMBER Archive (2008)

Subject: Re: AMBER: (no subject)

From: Eddie Mende (pckboy_at_gmail.com)
Date: Fri Feb 22 2008 - 00:31:01 CST

Hello Syed

You may want to re-check your structure

Your problem is related to the initial structure, perhaps you have some
atoms overlapping and therefore the energy
gets out of bounds. You could make a ramachandran plot with some
software and have a look into what is wrong
with your bonds.

Regards

Eduardo
Syed Tarique Moin wrote:
> Hello,
>
> I am trying to minimize a complex, but i was stuck by the linmin
> error. I am attaching output file of minimization.
>
> Thanks in advance
>
> Regards
>
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