AMBER Archive (2008)

Subject: Re: AMBER: Regarding:PME and neturalization

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Jani,
I think this thread will help you understand more about this:
http://structbio.vanderbilt.edu/archives/amber-archive/2007/4731.php

Yes, you should use PME.

Good luck :-)

Lars

On Feb 20, 2008 6:12 AM, jani sahil <genomejani_at_gmail.com> wrote:
> Dear All,
> I am stuck in a problem since long and i tired various way
> Can any one can guide me. That if I use PME than can I simulate
> Charged protein?
> Is their any other protocol should be follow prior to use of PME for charged
> protein
>
>
> Regards
> Jani Vinod
>

-- 
mvh Lars Skjærven
Institutt for Biomedisin
Universitetet i Bergen
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• Next message: abiram abiram: "AMBER: Dimension of the solvated box?"
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• In reply to: jani sahil: "AMBER: Regarding:PME and neturalization"
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