AMBER Archive (2008)

Subject: AMBER: Amber 9 installation

From: Taufik Al-Sarraj (taufik.alsarraj_at_utoronto.ca)
Date: Tue Feb 05 2008 - 09:14:56 CST

Thank Ross,
you are absolutely right! i used the x86 version first. Unfortunately
installing g95 (mips) brought another error

Starting installation of AMBER 9 (serial) at ....
          cd lib; make install
          cpp -traditional -P -xassembler-with-cpp new2oldparm.f >
  _new2oldparm.f
          g95 -c -O0 -fno-second-underscore -o new2oldparm.o
  _new2oldparm.f
as ERROR: -- not allowed in non XPG4 environment
as ERROR parsing --traditional-format: unknown flag
as ERROR parsing -no-mdebug: unknown flag
as ERROR parsing -mabi=n32: unknown flag
*** Error code 1 (bu21)
*** Error code 1 (bu21)

Are there different instructions for installing amber9 on IRIX? or am i
missing something very basic?

Ross Walker wrote:
> Hi Taufik,
>
> Are you certain that you downloaded the Irix version of g95? You need to
> install this first and verify that it works.
>
> Likely you have the wrong version of g95. I.e. the x86 version and you are
> trying to run it on Irix. You likely need to get the Irix Mips version of
> g95, assuming that you have a MIPS chip in your SGI machine.
>
> see: http://ftp.g95.org
>
> and in particular the version you need which I believe is:
> http://ftp.g95.org/g95-mips-irix.tgz
>
> All the best
> Ross
>
> /\
> \/
> |\oss Walker
>
> | Assistant Research Professor |
> | San Diego Supercomputer Center |
> | Tel: +1 858 822 0854 | EMail:- ross_at_rosswalker.co.uk |
> | http://www.rosswalker.co.uk | PGP Key available on request |
>
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>
>> -----Original Message-----
>> From: owner-amber_at_scripps.edu
>> [mailto:owner-amber_at_scripps.edu] On Behalf Of Taufik Al-Sarraj
>> Sent: Monday, February 04, 2008 13:53
>> To: amber_at_scripps.edu
>> Subject: AMBER: Amber 9 installation
>>
>> Hello,
>>
>> I recently bought Amber 9 and i am having difficulty installing it.
>> In the README Page i should install AMBER 9 (serial) first
>> just to make
>> sure it is working fine.
>>
>> in step 2 ./configure g95 (this works)
>> make serial (does not work)
>>
>> the error
>>
>> Starting installation of AMBER 9 (serial) at ....
>> cd lib; make install
>> cpp -traditional -P -xassembler-with-cpp new2oldparm.f >
>> _new2oldparm.f
>> g95 -c -O0 -fno-second-underscore -o new2oldparm.o
>> _new2oldparm.f
>> sh: g95: cannot execute
>> *** Error code 126 (bu21)
>> *** Error code 1 (bu21)
>>
>> I am using Irix from SGI.
>>
>> Thank you for your help
>>
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>
>
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