AMBER Archive (2008)

Subject: AMBER: Regarding neutral Arginine unit

From: jani sahil (genomejani_at_gmail.com)
Date: Tue Jan 15 2008 - 10:19:00 CST

Hello ,
I am simulating a acid protease which is charged protein.
So I want to neutralize all the charged side chains. I can see
that amber has parameters for neutral forms of Asp, Glu, Lys and His, but
I don't see a neutral form for Arg

please can any one suggest e how i can neutralize Arg

Thanking in anticipation

Regards
Jani Vinod

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