AMBER Archive (2008)

Subject: AMBER: Using VMD to calculate end-to-end distance?

From: Lili Peng (
Date: Mon Jan 14 2008 - 16:41:55 CST


I have a question regarding using VMD. Does anyone know how to calculate
end-to-end distance in VMD from a PDB file? Currently I do not have a
topology or trajectory file, only the PDB.

Thanks in advance,

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