AMBER Archive (2008)

Subject: AMBER: Visualizing Electrostatic Potential

From: Seth Lilavivat (sethl_at_gatech.edu)
Date: Fri Jan 11 2008 - 13:57:31 CST

Dear Amber Community,

I am sending out a call for help to you because I have not had much luck
using VMD with APBS. I have posted on VMD and APBS mailing lists but could
not get to the bottom of this so I decided to turn here. I am running RedHad
EL4 on an AMD64. I tried two different binaries 0.5.0 and 0.5.1 and get the
following error when I run abps from the commandline:

     "error while loading shared libraries: libgfortran.so.1: cannot open
shared object file: No such file or directory"

When I compiled the AMD64 version from source and run apbs from the command
line, I get this error:

     "error while loading shared libraries: libimf.so: cannot open shared
object file: No such file or directory"

In either case, I located the library and made sure it was in the path...
but the error did not go away. Does anyone have any suggestions regarding
this or is there an alternative method of calculating and viewing
electrostatics?

Thanks,
Seth

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