AMBER Archive (2007)

Subject: Re: AMBER: How to apply psuedo-bonds for restraints

From: David A. Case (case_at_scripps.edu)
Date: Wed Dec 05 2007 - 20:16:43 CST

On Wed, Dec 05, 2007, Seth Lilavivat wrote:
>
> I want to add specific inter-residue restaints in the form of a
> torsion angle of a psuedo-bond.

You pretty much need to use the "NMR" restraints here.

> Is there a way to specify specific residue and atom names in a
> frcmod file?

No...frcmod files just have atom types, not specific residues and atoms.

...dac

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