AMBER Archive (2007)

Subject: AMBER: xleap patch for xorg-7.3 ??

From: M. L. Dodson (activesitedynamics_at_comcast.net)
Date: Thu Nov 08 2007 - 13:04:05 CST

I found the following patch to be necessary for successfully
linking xaLeap with xorg-7.3

I do not know how whether this is generally needed or if it is a
peculiarity of my environment:

[mldodson_at_histidine.activesitedynamics.com:135] % uname -a
FreeBSD histidine.activesitedynamics.com 7.0-BETA2 FreeBSD 7.0-BETA2 #0:
Tue Nov 6 09:42:45 CST 2007
mldodson_at_histidine.activesitedynamics.com:/usr/obj/usr/src/sys/HISTIDINE
  amd64

compilers were gfortran/gcc:

[mldodson_at_histidine.activesitedynamics.com:138] % gfortran -v
Using built-in specs.
Target: x86_64-portbld-freebsd7.0
Configured with: ./..//gcc-4.2-20071024/configure --disable-nls
--with-system-zlib --with-libiconv-prefix=/usr/local
--with-gmp=/usr/local --program-suffix=42
--libdir=/usr/local/lib/gcc-4.2.3
--with-gxx-include-dir=/usr/local/lib/gcc-4.2.3/include/c++/
--disable-libgcj --prefix=/usr/local --mandir=/usr/local/man
--infodir=/usr/local/info/gcc42 x86_64-portbld-freebsd7.0
Thread model: posix
gcc version 4.2.3 20071024 (prerelease)

Hardware was:

CPU: Intel(R) Pentium(R) 4 CPU 3.00GHz (3000.01-MHz K8-class CPU)

bugfix-all as of 8 Nov 2007 was applied, as were the leap source
code files described by FyD on the list a couple of weeks ago
(augmenting the capabilities of leap by being able to save mol2
files, among other things).

Bud Dodson 

-- 
M. L. Dodson
Business Email: activesitedynamics-at-comcast-dot-net
Personal Email:	mldodson-at-comcast-dot-net
Phone:	eight_three_two-56_three-386_one

--- leap/src/leap/Makefile.orig 2007-10-03 09:59:50.000000000 -0500
+++ leap/src/leap/Makefile 2007-11-08 12:08:59.000000000 -0600
@@ -114,7 +114,7 @@
 # XlcDL.o(.text+0xe2): undefined reference to `dlsym'
 #
 XALEAP_LIB = ../Xraw/libXaw.a ../Wc/libWcLeap.a ../Xpm/libXpm.a \
- ../Xmu/libXmu.a $(XLIBS) -lXt -lXext -lSM -lICE -lX11 $(LM) -lpthread
+ ../Xmu/libXmu.a $(XLIBS) -lXt -lXext -lSM -lICE -lX11 -lXau -lXdmcp $(LM) -lpthread
 
 OBJ = $(OA) $(OG) $(OO) $(OL)
 

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