AMBER Archive (2007)

Subject: AMBER: anal problem

From: varsha rani (varsha.devil_at_gmail.com)
Date: Tue Oct 30 2007 - 05:48:03 CST

Hello Amber Users

I dont have any technical question . My doubt is regarding the usage of anal
in amber 9 version.
I want to ask, Can we actually beleive on the results given by anal, reason
for this doubt is becasue anal module is no longer available in the Amber 9
manual . no documentation , no tutorials.
I heard that some of its charecteristics have been included in MM PBSA , IS
that true ? Lets say the interaction energies in a single protein , can we
do that using MM PBSA.

Waiting for the Reply

Thanks & Regards
Varsha

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