AMBER Archive (2007)

Subject: AMBER: Problems compiling Amber9 on IBM-AIX

From: Sampath Koppole (sampathkoppole_at_yahoo.com)
Date: Mon Oct 08 2007 - 06:42:20 CDT

Hello,
I am trying to compile Amber 9 on IBM-AIX machine and
I get the following error: (Here is the last few lines
from the compilation !!)

        xlf90 -qfree=f90 -o sander evb_vars.o
evb_input.o evb_init.o evb_all
oc.o evb_dealloc.o check_input.o evb_io.o
evb_keywrd.o exchange_CM.o evb_mcp.o
 evb_force.o diabatic.o evb_2stdebug.o
egap_umb_2stdebug.o exchange_gauss.o ex
change_warshel.o morsify.o morse_anal2num.o
evb_matrix.o evb_ntrfc.o out_evb.o c
onstants.o stack.o qmmm_module.o trace.o lmod.o
decomp.o icosasurf.o egb.o find
mask.o pb_force.o pb_exmol.o pb_mpfrc.o pb_direct.o
pb_list.o np_force.o sa_driv
er.o relax_mat.o nmr.o multisander.o sander.o
trajene.o cshf.o nmrcal.o pearsn.
o printe.o runmin.o rdparm.o mdread.o locmem.o
runmd.o getcor.o degcnt.o decnv
h.o fastwt.o parallel.o shake.o ene.o mdwrit.o
minrit.o set.o dynlib.o mdfil.o
 nmlsrc.o ew_force.o ew_setup.o ew_box.o ew_bspline.o
ew_fft.o nonbond_list.o s
hort_ene.o ew_recip.o pcshift.o align.o rfree.o
rgroup.o random.o amopen.o deb
ug.o ew_recip_reg.o ew_handle_dips.o ew_dipole_recip.o
 mexit.o new_time.o extra
_pts.o thermo_int.o matinv.o assert.o mmtsb.o
mmtsb_client.o erfcfun.o veclib.o
  is_init.o constantph.o prn_dipoles.o ips.o sglds.o
amoeba_valence.o amoeba_mu
ltipoles.o amoeba_recip.o amoeba_interface.o
amoeba_direct.o amoeba_mdin.o amoeb
a_adjust.o amoeba_self.o amoeba_vdw.o amoeba_induced.o
amoeba_runmd.o bintraj.o
  spatial_recip.o spatial_fft.o parms.o qm_mm.o
qm_link_atoms.o qm_nb_list.o qm_
extract_coords.o qm_ewald.o qm_gb.o qm_zero_charges.o
qm_print_info.o qm_assig
n_atom_types.o qm2_allocate_e_repul.o
qm2_calc_charges.o qm2_calc_rij_and_eqns.
o qm2_dihed.o qm2_energy.o qm2_fock.o
qm2_get_qm_forces.o qm2_get_qmmm_forces.o
 qm2_h1elec.o qm2_hcore_qmqm.o qm2_hcore_qmmm.o
qm2_identify_peptide_links.o q
m2_load_params_and_allocate.o qm2_repp.o
qm2_rotate_qmqm.o qm2_scf.o qm2_setup_
orb_exp.o qm2_smallest_number.o qm2_dftb_module.o
qm2_dftb_broyden.o qm2_dftb_
dispersion_egr.o qm2_dftb_dispersion_params.o
qm2_dftb_dispersionread.o qm2_dft
b_eglcao.o qm2_dftb_energy.o qm2_dftb_ewevge.o
qm2_dftb_externalchgrad.o qm2_df
tb_externalshift.o qm2_dftb_fermi.o qm2_dftb_forces.o
qm2_dftb_gamma.o qm2_dft
b_gammamat.o qm2_dftb_get_qmmm_forces.o
qm2_dftb_gettab.o qm2_dftb_load_params.
o qm2_dftb_long_range.o qm2_dftb_main.o
qm2_dftb_my_gradient.o qm2_dftb_my_mull
iken.o qm2_dftb_repulsiv.o qm2_dftb_self.o
qm2_dftb_shift.o qm2_dftb_short_ran
ge.o qm2_dftb_skpar.o qm2_dftb_slkode.o
qm2_dftb_slktrafo.o qm_div.o force.o
 ../lmod/lmod.a ../dcqtp/src/qmmm/libdivcon.a
../lapack/lapack.a ../blas/blas.a
  ../lib/nxtsec.o ../lib/sys.a -L/usr/lib -lmassv
-L/usr/lib -lblas

ld: 0711-317 ERROR: undfined symbol: .vtanh
ld: 0711-345 use the -bloadmap or -bnoquiet option to
obtain more information

make: 1254-004 The error code from the last command is
8

Stop.
make: 1254-004 The error code from the last command is
2

sbio1>

Could you please help ?

Thanks a lot,
Cheers,
Sampath. 

-- 
Check my web home:
http://www.sampath.koppole.com
*****************************************************************
Sampath Kumar Koppole,                                      
The Computational Molecular Biophysics Group,                                     
Interdisciplinary Center for Scientific Computing (IWR),     
368, Im Neuenheimer Feld,                                   
Heidelberg. D-69120.                                        
Germany.                                                    
Lab      : +49-6221-54-8805                                   
Mobile   : +49-173-660-5660                                   
Email    : sampath.koppole_at_iwr.uni-heidelberg.de
*****************************************************************

       
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