AMBER Archive (2007)

Subject: AMBER: Constant pH

From: Eddie Men (pckboy_at_gmail.com)
Date: Tue Oct 02 2007 - 04:41:31 CDT


Greetings Amberites!

I am trying to set my cpin file, for constant pH molecular dynamics
simulations. Unfortunely I have no idea from the manual as how to set
the initial cpin values to a given initial pH. Can I just take the
defaults and simulate to a constant pH by using the solvph flag?.
Can anyone send me a link with examples of how to use the cpinutil.pl
util?. I got a place a couple of days but can not find it anymore :(

Help would be appreciated.

eddie
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