AMBER Archive (2007)

Subject: Re: AMBER: fragment parametrization tutorial?

From: David A. Case (case_at_scripps.edu)
Date: Sun Sep 30 2007 - 00:04:16 CDT

On Sat, Sep 29, 2007, Carlos Simmerling wrote:

> how about
> *Simulating a Solvated Protein that Contains Non-Standard Residues*
> http://www.rosswalker.co.uk/tutorials/amber_workshop/Tutorial_four/

You might also look at:

http://amber.scripps.edu/antechamber/example.html

There is an example there of preparing a non-standard residue. (But we need
to make things simpler than they are now.)

...dac

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