AMBER Archive (2007)

Subject: Re: AMBER:

From: David A. Case (case_at_scripps.edu)
Date: Sun Sep 23 2007 - 20:31:19 CDT

On Fri, Sep 21, 2007, kanon gemini wrote:
>
> I'm wondering in the formula p 165 of the amber8 manual describing how the
> restrained in time averaged manner is implemented
> what " t' " stands for ? t is the current time does t'=t+2fs (if we used
> shake)

t' is a dummy variable that is being integrated over. The range of t' goes
from 0 to t (the limits of the integral).

...dac

-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber_at_scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu