AMBER Archive (2007)

Subject: Re: AMBER: installing LMOD error

From: Xioling Chuang (xioling_c_at_hotmail.com)
Date: Tue Sep 04 2007 - 21:04:17 CDT

> > make[2]: Entering directory `/softwares/amber9/src/lmod/xmin'
> > Makefile:6: warning: overriding commands for target `.f.o'
> > ../../config.h:82: warning: ignoring old commands for target `.f.o'
> > make[2]: *** No rule to make target `ieee.c', needed by `ieee.o'. Stop.
>
>You will need to install bugfixes 6 and 17 from the Amber web site (we
>recommend that you apply all of the bugfixes, using bugfix.all).

I already installed all bugfixes using command

cd $AMBERHOME
patch -p0 -N -r patch_rejects < bugfix.all
(note, I downloaded file bugfix.all into $AMBERHOME directory)

cd src
make clean
cd sander
make sander

I still got the same error concerning file "ieee"

>Then you will need to re-run the lmod_install.sh script.
>...good luck...dac

I could not find the file "lmod_install.sh"

Any suggestion, please.

Xioling

P.S. below is Makefile
==============================
1. $AMBERHOME/src/lmod/lmod/Makefile
==============================

SHELL=/bin/sh
VPATH=
include ../../config.h

.f.o: $<
        $(FPP) $< > _$<
        $(FC) -c $(FOPTFLAGS) -o $@ _$<

LMOD_SUPPLIED= arpkdrv.o ieee.o liblmod.o

LMOD_UNAVAILABLE= lmod.o

install: $(USE_LMODLIB)

ieee.o: ieee.c
        $(CC) -c $(CFLAGS) $(CPPFLAGS) -O0 -o $@ $<

clean:
        -/bin/rm -f ieee.o lmod.o _*.f

===================================
2. $AMBERHOME//src/lmod/xmin/Makefile
===================================

SHELL=/bin/sh
VPATH=
include ../../config.h

.f.o: $<
        $(FPP) $< > _$<
        $(FC) -c $(FOPTFLAGS) -o $@ _$<

LMOD_SUPPLIED= ieee.o libxmin.o mcsrch.o

LMOD_UNAVAILABLE= xmin.o

install: $(USE_LMODLIB)

ieee.o: ieee.c
        $(CC) -c $(CFLAGS) $(CPPFLAGS) -O0 -o $@ $<

clean:
        -/bin/rm -f ieee.o xmin.o _*.f

=======================================

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