AMBER Archive (2007)

Subject: Re: AMBER: creating topology files for RNA DNA hybrid.molecule

From: saurabh agrawal (imsam100_at_yahoo.co.in)
Date: Mon Sep 03 2007 - 23:21:56 CDT

hi,

Please check with point no. 4 of section 2.2 in amber8
manual. I think it will help you.

saurabh

--- msubhamoy_at_ibab.ac.in wrote:

> Respected Sir
>
> I am trying to build topology files for a RNA-DNA
> hybrid molecule with rna on
> one strand and dna on the other. can anyone help me
> how to write
> an unit list for the system while using loadpdb.
> please clarify with examples as
> I am new to this field.
>
> thanking
> you
>
> s.mukerji
>
>
-----------------------------------------------------------------------
> The AMBER Mail Reflector
> To post, send mail to amber_at_scripps.edu
> To unsubscribe, send "unsubscribe amber" to
> majordomo_at_scripps.edu
>

      Once upon a time there was 1 GB storage in your inbox. To know the happy ending go to http://help.yahoo.com/l/in/yahoo/mail/yahoomail/tools/tools-08.html
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber_at_scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu