AMBER Archive (2007)

Subject: Re: AMBER: antechamber question

From: Junmei Wang (junmwang_at_yahoo.com)
Date: Fri Aug 31 2007 - 15:07:09 CDT

Hi, John,
That message is just for notification. It does not mean your molecule is bad.

All the best

Junmei
 
"Beale, John" <jbeale_at_stlcop.edu> wrote: I have a question about antechamber. When processing a molecule through antechamber, the program gives me this first:
  
 "Info: Bond types are assigned for a valence state of 18 with penalty of 2."
  
 What does this mean? Does it mean that my system is somehow erroneous?
  
 John Beale
  

       
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