AMBER Archive (2007)

Subject: Re: AMBER: docking ability

From: Scott Brozell (sbrozell_at_scripps.edu)
Date: Sun Aug 19 2007 - 13:19:08 CDT

Hi,

On Wed, 15 Aug 2007, anna duraj wrote:

> Hi all,
>
> Does Amber have docking ability?

No, the Amber package of molecular simulation programs does not.
But some of Amber has been merged with DOCK:
in DOCK 6 scoring via Amber can be used with much of the functionality
of DOCK. See http://dock.compbio.ucsf.edu/DOCK_6/index.htm
For details on Amber score:
http://dock.compbio.ucsf.edu/DOCK_6/dock6_manual.htm#AMBERScore

Scott

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