AMBER Archive (2007)

Subject: RE: AMBER: Building parallel Amber 9.0

From: Ross Walker (ross_at_rosswalker.co.uk)
Date: Wed Aug 15 2007 - 12:43:28 CDT

Hi Rajendra,

Are you sure this just relates to QM/MM? Can you run regular sander jobs in
parallel? What about running the QM/MM calculation in serial does that work?
Can you run the parallel test cases okay?

We will need much more info to try to find out what is going on here.

All the best
Ross

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> -----Original Message-----
> From: owner-amber_at_scripps.edu
> [mailto:owner-amber_at_scripps.edu] On Behalf Of Rajendra P. OJHA
> Sent: Wednesday, August 15, 2007 08:44
> To: amber_at_scripps.edu
> Subject: RE: AMBER: Building parallel Amber 9.0
>
> Dear Users
> I am getting following message and the job stops
> during QM calculation.
> Please suggest
> Ojha
> Rank 0:9: MPI_Bcast: vapi_async_event_handler(): n26:
> port error on port 1
>
> Rank 0:8: MPI_Reduce: vapi_async_event_handler():
> n26: port error on port 1
>
>
> Rank 0:8: MPI_Bcast: vapi_async_event_handler(): n26:
> port error on port 1
>
> MPI_Recv: vapi_async_event_handler(): n26: port error
> on port 1
>
> Rank 0:8: MPI_Allreduce: vapi_async_event_handler():
> n26: port error on port 1
> MPI_Sendrecv: vapi_async_event_handler(): n26: port
> error on port 1
> MPI_Barrier: vapi_async_event_handler(): n26: port
> error on port 1
>
>
>
>
>
>
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