AMBER Archive (2007)

Subject: AMBER: HOW TO CALCULATE FREE ENERGY OF A DNA DUPLEX USING MMPBSA

From: msubhamoy_at_ibab.ac.in
Date: Wed Aug 08 2007 - 08:08:04 CDT

RESPECTED SIR,

 WE ARE TRYING TO GET A SAMPLE INPUT FILE FOR RUNNING MMPBSA. CAN ANYONE HELP US
IN GETTING A SAMPLE INPUT FILE

  FOR CALCULATING FREE ENERGY OF DNA DUPLEX(ONE STRAND CONSIDERED AS RECEPTOR
AND THE OTHER STRAND CONSIDERRED AS LIGAND)

                                     THANKS
                                                S.MUKHERJEE

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