AMBER Archive (2007)

Subject: Re: AMBER: errors in SHIFTS execution

From: Thomas Pochapsky (pochapsk_at_brandeis.edu)
Date: Mon Jul 30 2007 - 12:06:04 CDT

Uh, oh. Dumb mistake. Pointers were incorrectly set in my.cshrc, so
$SHIFTSHOME and $NABHOME were interchanged. It all works fine now.
Mea culpa. Thanks for your help. Tom
On Jul 30, 2007, at 11:37 AM, David A. Case wrote:

> On Mon, Jul 30, 2007, Thomas Pochapsky wrote:
>>
>> sh: /tcpl1/tomp/nab-5.1.2/bin/reduce: No such file or directory
>
> OK: this is the problem. When you did the "make install" for
> shifts4.2, the
> reduce program was not created. Go to the $SHIFTSHOME directory, type
> "make install", and look carefully for errors. Post any such
> errors here.
> Also, please let us know what "gcc --version" reports.
>
> ...regards...dac
>
> --
>
> ==================================================================
> David A. Case | e-mail: case_at_scripps.edu
> Dept. of Molecular Biology, TPC15 | fax: +1-858-784-8896
> The Scripps Research Institute | phone: +1-858-784-9768
> 10550 N. Torrey Pines Rd. | skype: dacase
> La Jolla CA 92037 USA | http://www.scripps.edu/case
> ==================================================================
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