AMBER Archive (2007)

Subject: Re: AMBER: Slight_error_on_Compiling_Replica_Exchange

From: Ye Mei (ymei_at_itcc.nju.edu.cn)
Date: Wed Jul 04 2007 - 04:30:09 CDT

make sure that the directory $AMBERHOME/exe exists.

        
Best regards,
                                 
Ye Mei
ymei_at_itcc.nju.edu.cn
Institute of Theoretical and Computational Chemistry
Key Laboratory of Mesoscopic Chemistry
School of Chemistry and Chemical Engineering
Nanjing University
Nanjing 210093
P.R.China
2007-07-04

======= 2007-07-04 17:02:38 j j wrote=======

>Dear Amber Users,
>I have in mind trying some md with replica exchange.
>I read in the manual I should specify:
>make AMBERBUILDFLAGS='-DREM' parallel
>and then recompile.
>The steps followed are:
>cd $AMBERHOME/src/sander
>make clean
>and then the previos make.
>At the end I got the following error message:
>[...]
>/bin/mv sander sander.LES ../../exe
>/bin/mv: when moving multiple files, last argument must be a directory
>Try `/bin/mv --help' for more information.
>make: *** [parallel] Error 1
>....
>I think everything runs fine but just moving the sander and sander.LES
>compiled, isn´t it?.
>I attack the full output of the messages generated in a pdf file,
>thank you,
>JJ

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