AMBER Archive (2007)

Subject: Re: AMBER: on PATH

From: Francesco Pietra (chiendarret_at_yahoo.com)
Date: Tue Jun 26 2007 - 15:15:11 CDT

David:
Following your warning that setting AMBERHOME must precede that of PATH..., I
commented out "PATH .." in my .bashrc. That failed to bring back the env var
AMBERHOME, while ":exe" disappered from PATH ... , as obtained from printenv.

Then I set in my .bashrc the following two lines:

AMBERHOME=/usr/local/amber9

PATH=$PATH:$AMBERHOME/exe; export AMBERHOME PATH

Now

$ echo $AMBERHOME
   /usr/local/amber9

$ echo $AMBERHOME/exe
  /usr/local/amber9/exe

$ printenv

reports /usr/local/amber9/exe

Are these settings correct?

Thanks

francesco

--- "David A. Case" <case_at_scripps.edu> wrote:

> On Tue, Jun 26, 2007, Francesco Pietra wrote:
>
> > I must have done something very silly while at the first steps of
> installing
> > amber9. After untarring as described in the readme on the CD, getting
> > /usr/local/amber9
> >
> > I set (bash shell)
> >
> > $ AMBERHOME=/usr/local/amber9; export AMBERHOME
>
> Did you also put this in your .bashrc? AMBERHOME needs to be set before
> you refer to it here:
>
> > Then I set in my .bashrc
> >
> > PATH=$PATH:$AMBERHOME/exe; export AMBERHOME PATH
> >
>
> I'm just guessing here; maybe someone else will see some other problem.
>
> ...dac
>
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