AMBER Archive (2007)

Subject: Re: AMBER: software to extract data from the output file??

• Next message: Cenk Andac: "AMBER: Question about determination of hydration points in binding sites"
• Previous message: AYTUG TUNCEL: "AMBER: inconsistency between PBSA and GBSA - help"
• In reply to: Avinash Kumar: "AMBER: software to extract data from the output file??"
• Messages sorted by: [ date ] [ thread ] [ subject ] [ author ]

Avinash Kumar wrote:
> My question is this..
> suppose i ve finished running molecular dynamics and ve
> gotten the output file.. is there any ready made sofware available to
> easily extract data from the output file.??
Your computer probably has all you need: grep and awk. You can probably
visualize results quickly with grace/xmgrace and gnuplot. Those are all
part of standard Linux distributions nowadays.

Gustavo.
>
> ------------------------------------------------------------------------
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber_at_scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu

• Next message: Cenk Andac: "AMBER: Question about determination of hydration points in binding sites"
• Previous message: AYTUG TUNCEL: "AMBER: inconsistency between PBSA and GBSA - help"
• In reply to: Avinash Kumar: "AMBER: software to extract data from the output file??"
• Messages sorted by: [ date ] [ thread ] [ subject ] [ author ]