AMBER Archive (2007)

Subject: AMBER: Finding x-displacement

From: Ben Tan (u46862_at_yahoo.com)
Date: Tue May 15 2007 - 04:23:11 CDT

Hi All,
  I would like to know how to use AMBER to determine the x-displacement (displacement of nucleotide base-pair from the helical axis) for a DNA duplex molecule over the simulation duration.
   
  Thanks
  Benjamin.

       
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