AMBER Archive (2007)

Subject: Re: AMBER: FW: Query regarding using tleap for preparing carbohydrate molecule

From: Gustavo Seabra (gustavo.seabra_at_gmail.com)
Date: Mon May 07 2007 - 07:36:15 CDT

Ross Walker wrote:
> From: Neha Sureshchandra Gandhi [mailto:n.gandhi_at_postgrad.curtin.edu.au]
> Dear Prof.Ross,
>
> I am using AMBER for the first time and following your tutorials for
> AMBER. I want to perform MM PBSA simulations for carbohydrates (gags
> which are highly anionic molecules). I am using Glycam04 forcefield but
> I get errors (log file is attached for your reference). Kindly advice
> how do I get my files working?
>
The log file didn't really come in the forward...

Gustavo.
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