AMBER Archive (2007)

Subject: AMBER: command line alternatives for teLeap

From: Neelanjana Sengupta (senguptan_at_gmail.com)
Date: Wed May 02 2007 - 23:21:07 CDT

Hello Amber users,
I must first thank you for the help you have extended so far.

I am doing the Amber tutorials. However, due to settings in our server, I am
only able to use teLeap only (and not xLeap, and hence have access to
command line only). Hence, I am unable to perform the parts that work with
the graphical interface. For example, in Tutotial 4, I cannot do the part
that specifies charge and type of the CUA residue:
http://www.rosswalker.co.uk/tutorials/amber_workshop/Tutorial_four/section2.htm

Could you please specify the alternatives for teLeap (ie. the command line
equivalent for the options that come with 'edit')?

Thanks! 

-- 
****************************************
Neelanjana Sengupta, PhD student
Dept. of Chemistry
Univ. of California-Irvine
Irvine, CA 92697
USA
Phone: 1-949-824 9921
email: sengupta_at_uci.edu
****************************************

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