AMBER Archive (2007)

Subject: Re: AMBER: Can I measure improper torsion by ptarj?

From: Bill Ross (ross_at_cgl.ucsf.edu)
Date: Tue Mar 13 2007 - 11:23:24 CST

> > In fact, I would like to know the angle formed by J atom and the plane
> > K-I-L
> >
> > J
> > |
> > K
> > / \
> > I L
 
> ptraj does not have this functionality.

Carnal will calculate the angle between J-K and the normal to
the plane K-I-L. However it is no longer a supported program.

Bill
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