AMBER Archive (2007)

Subject: AMBER: Energy calculation by Anal

From: Alexander Rubinstein (arubin_at_unmc.edu)
Date: Thu Feb 08 2007 - 14:11:16 CST


Dear Amber Users,
I am trying to use Anal module of Amber 7 to calculate electrostatic
interaction energy between
two ionogenic groups of my protein of interest.
I looked on the tutorial page for a sample in writing the input file but I
cannot find one.
Does any one have a sample input file that I can look at for reference?
Thank you very much for consideration.
Alex

Alexander Rubinstein, Ph.D.
UNMC Eppley Cancer Center
Molecular Modeling Core Facility
_________________________________
University of Nebraska Medical Center
986805 Nebraska Medical Center
Omaha, Nebraska 68198-6805
USA
Office: (402) 559-5319
Fax: (402) 559-4651
E-mail: arubin_at_unmc.edu
WWW: http://www.unmc.edu/Eppley
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