AMBER Archive (2007)

Subject: Re: AMBER: mm_pbsa Array reference error

From: Scott Pendley (scott.pendley_at_gmail.com)
Date: Wed Jan 31 2007 - 11:48:36 CST

Syed,

This questions has been asked many times and a quick search of the archives
should have helped you out immensely. I have only seen this error when
eithor 1) I forget to create snapshots and then try to conduct mm_pbsa on a
lack of snapshots or 2) the name of the snapshots does not match the name
specificied in the input file for the mm_pbsa.pl. If this is not the case,
please send me your input file and I can help you trouble shoot it.

Scott

On 1/27/07, Syed Tarique Moin <tarisyed_at_yahoo.com> wrote:
>
> Hello,
>
> Anyone can suggest me a solution for the following error that i am facing
> to run mm_pbsa.pl.
>
> Can't use an undefined value as an ARRAY reference at
> /usr/local/amber8/src/mm_pbsa/mm_pbsa_statistics.pm
> line 903
>
> I want assistance to solve it.
>
> Regards
>
> Syed Tarique Moin,
> Junior Research Fellow,
> H.E.J. Research Institute of Chemistry,
> International Center for Chemical and Biological Sciences,
> University of Karachi, Karachi-75720, Pakistan
>
> tarisyed_at_yahoo.com
> tarisyed_at_hotmail.com
>
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