AMBER Archive (2007)

Subject: Re: AMBER: xleap

From: Navnit Kumar Mishra (navnit_at_chemi.muni.cz)
Date: Tue Jan 30 2007 - 05:53:11 CST


$AMBERHOME/exe/xleap -f leaprc.ff02
dipep = sequence { MET GLY }
edit dipep

I would suggest to go through manual leap section, you will find
interesting thing which you need to manipulate your structure according
to you requirement.

deepti nayar wrote:

> hi all
>
>
> I am suppose to build a dipeptide structure using amber9. can anyone
> please guide me so as where to start from.i am not gaining any help
> from the archive.
>
>
> thanx
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