AMBER Archive (2007)

Subject: AMBER: pmemd install error

From: Ji-Lai Li (jlutcc_at_gmail.com)
Date: Tue Jan 23 2007 - 00:59:27 CST


Dear Users:
   I can't install PMEMD in my machine: Linux x86_64. The MPI is openmpi,
and the environment variable was set to:
##Open MPI
setenv MPI_HOME /home/mds/progpack/openmpi-1.1.3/build/
setenv MPI_INCLUDE /home/mds/progpack/openmpi-1.1.3/build/include
setenv PATH /home/mds/progpack/openmpi-1.1.3/build/bin:$PATH
setenv LD_LIBRARY_PATH /home/mds/progpack/openmpi-1.1.3
/build/lib:$LD_LIBRARY_PATH
setenv MPILIB "-L$LD_LIBRARY_PATH -lmpich"

when I type in /home/mds/amber9/src/pmemd/
./configure linux_em64t ifort mpich
make install

it prompts:
.....................
ifort -c -auto -tpp7 -xW -ip -O3 parallel_dat.f90
fortcom: Error: parallel_dat.f90, line 96: Cannot open include file '
mpif-common.h'
      include 'mpif-common.h'
--------------^
fortcom: Error: parallel_dat.f90, line 227: This name does not have a type,
and must have an explicit type. [MPI_COMM_WORLD]
    call mpi_abort(mpi_comm_world, i, err_ret_code)
-------------------^
compilation aborted for parallel_dat.f90 (code 1)
make[1]: *** [parallel_dat.o] Error 1
make[1]: Leaving directory `/home/mds/amber9/src/pmemd/src'
make: *** [install] Error 2

I confirmed the include file 'mpif-common.h' in /home/mds/progpack/openmpi-
1.1.3/build/include.

Does anyone know what I"m doing wrong?

-- 
Ji-Lai Li

----------------------------------------------------------------------- The AMBER Mail Reflector To post, send mail to amber_at_scripps.edu To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu