AMBER Archive (2007)Subject: AMBER: pmemd install error
From: Ji-Lai Li (jlutcc_at_gmail.com) 
Date: Tue Jan 23 2007 - 00:59:27 CST
 
 
 
 
Dear Users:
 
   I can't install PMEMD in my machine: Linux x86_64. The MPI is openmpi,
 
and the environment variable was set to:
 
##Open MPI
 
setenv MPI_HOME /home/mds/progpack/openmpi-1.1.3/build/
 
setenv MPI_INCLUDE /home/mds/progpack/openmpi-1.1.3/build/include
 
setenv PATH /home/mds/progpack/openmpi-1.1.3/build/bin:$PATH
 
setenv LD_LIBRARY_PATH /home/mds/progpack/openmpi-1.1.3
 
/build/lib:$LD_LIBRARY_PATH
 
setenv MPILIB "-L$LD_LIBRARY_PATH -lmpich"
 
 when I type in /home/mds/amber9/src/pmemd/
 
./configure linux_em64t ifort mpich
 
make install
 
 it prompts:
 
.....................
 
ifort -c -auto -tpp7 -xW -ip -O3 parallel_dat.f90
 
fortcom: Error: parallel_dat.f90, line 96: Cannot open include file '
 
mpif-common.h'
 
      include 'mpif-common.h'
 
--------------^
 
fortcom: Error: parallel_dat.f90, line 227: This name does not have a type,
 
and must have an explicit type.   [MPI_COMM_WORLD]
 
    call mpi_abort(mpi_comm_world, i, err_ret_code)
 
-------------------^
 
compilation aborted for parallel_dat.f90 (code 1)
 
make[1]: *** [parallel_dat.o] Error 1
 
make[1]: Leaving directory `/home/mds/amber9/src/pmemd/src'
 
make: *** [install] Error 2
 
 I confirmed the include file 'mpif-common.h' in /home/mds/progpack/openmpi-
 
1.1.3/build/include.
 
 Does anyone know what I"m doing wrong?
 
 
-- 
Ji-Lai Li
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber_at_scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu
  
  
 |