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AMBER Archive (2007)Subject: AMBER: mm_pbsa vertex atom mismatch
From: AYTUG TUNCEL (ATUNCEL_at_ku.edu.tr)
Dear all,
I am trying to calculate the binding free energy of my receptor - ligand complex (both are protein chains) using MM-PB(GB)SA. When I run the mm_pbsa script I eventually get the results(statistics.out etc.), however I also get this message too,
vertex atom mismatch
I searched the list but I could not figure out the problem. Anybody have an idea?
Also I want to ask a second question,
Thanks for the help.
Aytug
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