AMBER Archive (2007)

Subject: Re: AMBER: output

From: Thaison Tran (ttran84_at_gmail.com)
Date: Sun Jan 14 2007 - 01:59:56 CST

yeah you could use the VI text viewer in UNIX.

use command: vi <filename> for example.... vi min.out this will
open and allow you to view the .out file, you could also do this with many
other files. To exit and not save type :q!, search online for VI commands
hope this helps.

Thaison

On 1/13/07, khn _ <khnb3_at_yahoo.com> wrote:
>
>
> hi
> is there any way that i could get a list of minimized
> energy for each residues or atoms in a protein (elec,
> vdw, bond, angle etc) after doing the minimization
> process using sander module? instead of the total
> energy for whole molecule as in what the general way
> of presenting the min.out file
>
> thanks and hope someone can help me
>
>
>
>
>
>
>
>
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