Equlibriation &cntrl imin=0, ntx=7, irest=1, ntpr=50, ntwr=500, iwrap=1, ntwx=500, ntwe=50, ntf=2, ntb=2, igb=0, scnb=2.0, scee=1.2, cut=10.0, nscm=50, nstlim=5000, dt=0.002, tempi=300., temp0=300., ntt=3, gamma_ln=1.0, dtemp=0., ntp=1, taup=2.0, ntc=2, tol=0.00001, ifqnt=1 / &qmmm qmmask=':549', qmcharge=-4, qmtheory=1, qmshake=1, qm_ewald=1, qm_pme=1 / &end &ewald vdwmeth=1, &end