AMBER Archive (2006)

Subject: Re: AMBER: bad connectivity - more detail

From: David A. Case (case_at_scripps.edu)
Date: Wed Dec 27 2006 - 12:31:58 CST

On Wed, Dec 27, 2006, Seth Lilavivat wrote:

> I tried setting the tail, head, connect1, and connect0 with no result :(

Not sure what you mean by "no result" here. Did LEaP give any reply? Try
using saveOff to save your residue, then examine (and perhaps modify) the
connect0 and connect1 atoms.

...regards...dac

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