AMBER Archive (2006)

Subject: AMBER: Atom Type problem

From: Steve Seibold (seibold_at_chemistry.msu.edu)
Date: Fri Dec 08 2006 - 10:01:23 CST

Hi Amber

I am sending the files that I am using. I am just trying to create prmtop and an inpcrd file of this HIX residue (HIX.pdb). If you load the HIX.lib ,HIX.pdb, Modfrcmod2.all and leaprc.ff03 everything seems to be ok. All atoms are accounted for and all types (and angles etc) are there also. But if you try and "saveamberparm HIX HIX.prmtop HIX.inpcrd" you will get the message "could not fine type: NX Parameter file was not saved".

Could someone assist me or at least let me know what I am doing wrong?

 

 

Cheers, Steve


  • application/octet-stream attachment: HIX.pdb


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