AMBER Archive (2006)

Subject: Re: AMBER: Problem with specifying NOSHAKEMASK

From: Gobind Singh Bisht (gsbisht1_at_gmail.com)
Date: Sun Dec 03 2006 - 21:11:57 CST

hi david,
           actually reducing the string size actually works but I need the
complete string for my simulations. Isnt't thr anywayw I can achieve that.
Right now If I give the complete string in one line, its being truncated by
sander.
thanx for ur cooperation
gobind
,
On 12/4/06, David A. Case <case_at_scripps.edu> wrote:
>
> On Sun, Dec 03, 2006, Gobind Singh Bisht wrote:
>
>
> > noshakemask=":2076-2086,2336-2346,2261-2266,1609-1619,1869-1879,1794-1799,
> > 2530-2540,2790-2800,2715-2720,3268-3290,3210-3222",
> > /
> > Error in group input::atommask.f::tokenize
> > illegal symbol in maskstr:
>
> Did you try a shorter mask to see if somehow the length is too large? The
> string probably needs to all be on one line -- it's not clear whether or
> not
> that is true for your input file.
>
> ....dac
>
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