AMBER Archive (2006)

Subject: AMBER: ptraj----radial output files

From: Esther Brugger (esther_brugger_at_yahoo.com)
Date: Wed Nov 29 2006 - 14:03:20 CST

Dear All,
 
 Recently, I start to use ptraj to extract some data from the mdcrd file. When I use radial to get rdf for 2 group atoms, I find I only get 2 output files (standard.xmgr & volume.xmgr). I didn't get carnal.xmgr, I don't know why. And also in each output file, there are 3 columns. I plot them. I don't know what the 3rd column is.
 
 Maybe I asked the basic question and maybe you have answered it before. If it is, I am sorry for posting it again. I just hope somebody can help me figure it out.
 
 Thank you very much.
 
 Bests
 

Esther B.

 
---------------------------------
Check out the all-new Yahoo! Mail beta - Fire up a more powerful email and get things done faster.
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber_at_scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu