AMBER Archive (2006)

Subject: Re: AMBER: NTR for implicit solvent? How to defin restrain for two disconnected sequences?

From: David A. Case (case_at_scripps.edu)
Date: Fri Nov 24 2006 - 01:02:21 CST

On Fri, Nov 24, 2006, a a wrote:

> I learnt from tutorial 1, section 5 that I can type
> as follows to define one continuous section to be restrained, but I cannot
> restraint two disconnected sequences. What should I do ?
>
> /
> Keep DNA fixed with weak restraints
> 10.0
> RES 1 20

try: RES 1 20 30 60

...dac
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