AMBER Archive (2006)

Subject: AMBER: ptraj and mdvel question

From: Jianhui (tianj_at_rpi.edu)
Date: Wed Nov 15 2006 - 13:07:06 CST

Hi Amber users,

In ptraj, I can use "trajin mdcrd 1 n 1" to read in the trajectory coordinate file.
Can I also put in the mdvel file at the same time and then save output file about the coordinate and velocity to pdb format? How to do it?
Thanks a lot in advance.

Best regards,
  
Jianhui
tianj_at_rpi.edu
2006-11-15

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