AMBER Archive (2006)

Subject: Re: AMBER: NAD parameters

From: cristian obiol (c.obiol_at_qf.ub.es)
Date: Thu Sep 28 2006 - 08:56:43 CDT

Dear Urszula
You can find the .prep and .parm files for NAD+ in this web :

http://pharmacy.man.ac.uk/amber/

And load them into leap.

Regards.

Cristian Obiol
Modeling of Biological Systems and
Drug Design Research Group
University of Barcelona.

> Dear Amber users,
>
> I want to simulate one protein with Zn2+ ion and with NAD. How can I
> prepare NAD.lib? Does anyone have the necessary amber lib for reading
> NAD into leap? Are there any examples I can follow?
>
> Thanks in advance!
>
> Urszula Uciechowska
>
>
>
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