AMBER Archive (2006)

Subject: Re: AMBER: Installing AMBER9 on cygwin (WinXP)

From: David A. Case (
Date: Tue Sep 12 2006 - 10:01:41 CDT

On Tue, Sep 12, 2006, HARADA Makoto wrote:
> I'm installing amber 9 on cygwin.
> However I've got the following error message.
> cd antechamber; make install
> make[1]: Entering directory `/usr/local/amber9/src/antechamber'
> gcc -c -O2 -m32 -o antechamber.o antechamber.c
> In file included from antechamber.c:23:
> prep.c: In function `rprepc':
> prep.c:192: error: `gt' undeclared (first use in this function)

[I already sent you this reply by private e-mail, but maybe it was not

I looks like you have a corrupted prep.c file, probably because bugfix.12 was
not applied correctly. You can easily check this by looking at line 192
of prep.c. My best guess is that somehow the ">" sign in the patch was
replaced with some html thing like ">". But in the absence of more
information, I cannot be sure.

Please look at your prep.c file, before and after applying bugfix.12. You
should probably look at the file "bugfix.all" as well, to see if it looks OK.

...good luck...dac

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