AMBER Archive (2006)

Subject: Re: AMBER: nmode memory allocation error

From: David A. Case (case_at_scripps.edu)
Date: Sat Sep 09 2006 - 23:17:54 CDT


On Fri, Sep 08, 2006, AYTUG TUNCEL wrote:

> Total memory required : 638255263 real words
> Total memory required : 24068644 integer words
>
> Maximum nonbond pairs 23622500
> ASSERTion 'ier == 0' failed in nmode.f at line 105.
>
> I am aware that this is a memory allocation problem and I need ~5,1 GB
> memory. The thing is I used 8 parallel Pentium 4, 2.4 Ghz, 1Gb memory
> machines.

Amber's nmode is not a parallel program, so it cannot make use of any memory
except that available to the cpu that is running the code.

...dac

-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber_at_scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu